API Documentation
=================


Tracking module
---------------

.. automodule:: roicat.tracking
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roicat.tracking.alignment module
--------------------------------

.. automodule:: roicat.tracking.alignment
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roicat.tracking.blurring module
-------------------------------

.. automodule:: roicat.tracking.blurring
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roicat.tracking.clustering module
---------------------------------

.. automodule:: roicat.tracking.clustering
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roicat.tracking.scatteringWaveletTransformer module
---------------------------------------------------

.. automodule:: roicat.tracking.scatteringWaveletTransformer
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roicat.tracking.similarity\_graph module
----------------------------------------

.. automodule:: roicat.tracking.similarity_graph
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Classification module
---------------------

.. automodule:: roicat.classification
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roicat.classification.classifier module
---------------------------------------

.. automodule:: roicat.classification.classifier
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roicat.pipelines module
-----------------------

.. automodule:: roicat.pipelines
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roicat.ROInet module
--------------------

.. automodule:: roicat.ROInet
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roicat.data\_importing module
-----------------------------

.. automodule:: roicat.data_importing
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roicat.helpers module
---------------------

.. automodule:: roicat.helpers
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.. _roicat-util-module:

roicat.util module
------------------

.. automodule:: roicat.util
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roicat.visualization module
---------------------------

.. automodule:: roicat.visualization
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